BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A05LP1|AL426298
(719 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1606 1393 0.0
>3x_Contig1606
Length = 11468
Score = 1393 bits (702), Expect = 0.0
Identities = 717/720 (99%), Gaps = 2/720 (0%)
Strand = Plus / Minus
Query: 1 tctcgtcctttcttgaggatccacattgctcaaagctggcgtttcaagttcagtatctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7057 tctcgtcctttcttgaggatccacattgctcaaagctggcgtttcaagttcagtatctga 6998
Query: 61 tttcttgtctgctga-caagctacgctcagtatcgctcattgtcacttaatatatgtgtt 119
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6997 tttcttgtctgctgagcaag-tacgctcagtatcgctcattgtcacttaatatatgtgtt 6939
Query: 120 tctctccctttccttgattcaagcgaacaaacagaaaaaaaaaatactcgtttcgaattc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6938 tctctccctttccttgattcaagcgaacaaacagaaaaaaaaaatactcgtttcgaattc 6879
Query: 180 aaacttagaatcacactctaatttccaatccaaacaagtttcctactgagatgtccctta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6878 aaacttagaatcacactctaatttccaatccaaacaagtttcctactgagatgtccctta 6819
Query: 240 cagtcacggcgagtaacctcctatcacctaagttgtcttttagcttgatgctctttctct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6818 cagtcacggcgagtaacctcctatcacctaagttgtcttttagcttgatgctctttctct 6759
Query: 300 attgacagaattgtaaatttcatgaaggcttcaaatccgtgtcttgtgacactgacgtac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6758 attgacagaattgtaaatttcatgaaggcttcaaatccgtgtcttgtgacactgacgtac 6699
Query: 360 caagtgatgtgaaatttccaaaatttaaagatttggaatcaaatacattgtagaatattt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6698 caagtgatgtgaaatttccaaaatttaaagatttggaatcaaatacattgtagaatattt 6639
Query: 420 gagtatgcacaaacatgttttgctgctgcatgagtgcattatatcactatctattggtat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6638 gagtatgcacaaacatgttttgctgctgcatgagtgcattatatcactatctattggtat 6579
Query: 480 agttattagcgcagtctaaccagttaaaaaagattgtgacgtatatcagaaatacaatca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6578 agttattagcgcagtctaaccagttaaaaaagattgtgacgtatatcagaaatacaatca 6519
Query: 540 ataataatgtttggcctacctcagcaacaatctgaagaagaaaaaagattgcatcaacag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6518 ataataatgtttggcctacctcagcaacaatctgaagaagaaaaaagattgcatcaacag 6459
Query: 600 caatccaaccagactttgactaacgctgcttacgcagctgccgctttatggttgtctcca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6458 caatccaaccagactttgactaacgctgcttacgcagctgccgctttatggttgtctcca 6399
Query: 660 ttgatctggcacttcattaagaagcaattcaaatkaatttcttcttaagctaagaatgaa 719
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6398 ttgatctggcacttcattaagaagcaattcaaatgaatttcttcttaagctaagaatgaa 6339
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7755
Number of Sequences: 1807
Number of extensions: 7755
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 719
length of database: 10,358,551
effective HSP length: 16
effective length of query: 703
effective length of database: 10,329,639
effective search space: 7261736217
effective search space used: 7261736217
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)